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Genes, Brain and Behavior

Wiley

All preprints, ranked by how well they match Genes, Brain and Behavior's content profile, based on 29 papers previously published here. The average preprint has a 0.01% match score for this journal, so anything above that is already an above-average fit. Older preprints may already have been published elsewhere.

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Genetic mapping in Collaborative Cross mouse strains identifies loci that affect initial sensitivity to cocaine

Schoenrock, S. A.; Gaines, C. H.; Kumar, P.; Khan, S. A.; Farrington, J.; Ferris, M. T.; Pardo-Manuel de Villena, F.; Valdar, W.; Bubier, J.; Tarantino, L. M.

2025-01-12 genetics 10.1101/2025.01.12.629464 medRxiv
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We identified two Collaborative Cross (CC) strains, CC004/TauUncJ (CC004) and CC041/TauUncJ (CC041), that differ significantly for locomotor response and self-administration of cocaine. In the current study, we crossed each of these strains to C57BL/6NJ (B6N) mice to produce two F2 populations and identify genetic loci that influence locomotor response to cocaine. We identified three significant loci on chromosomes 7, 11 and 14 in the CC041 F2 mapping cross that collectively explain 14% of the phenotypic variance for locomotor response to cocaine. We used a bioinformatic approach to identify high quality candidate genes that are genetically plausible, have functional relevance and are suitable for further exploration. Our study is the first to use CC strains to perform QTL mapping for addiction-related phenotypes and proposes several candidate genes for follow-up analyses.

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Behavioral variation across multiple phases of intravenous cocaine self-administration among genetically diverse mouse populations

Dickson, P. E.; Datta, U.; Wilcox, T. D.; Auth, A. A.; Ball, R. L.; Dunn, M.; Fisher, H. S.; Klein, A.; Leonardo, M. R.; Roy, T. A.; Saul, M. C.; Bubier, J. A.; Gagnon, L. H.; Philip, V. M.; Tarantino, L. M.; Jentsch, J. D.; Chesler, E. J.

2025-04-27 genetics 10.1101/2025.04.23.650259 medRxiv
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Genetic and other predisposing factors can influence the progression from initiation of drug intake to compulsive substance use through distinct biobehavioral processes. Operant cocaine self-administration studies in laboratory mice offer a powerful method to dissect the biology of this progression from initiation, dose-response, extinction, and cued reinstatement in a controlled, tractable system. However, many such studies encompass limited genetic diversity and rarely examine self-administration behaviors beyond the acquisition stage. Here, we study three high-diversity mouse populations - 50 strains from the Collaborative Cross (CC) reference panel, a large sample of Diversity Outbred (J:DO) population and their eight founder strains - to characterize the varied phenotypic manifestation of behaviors across multiple phases of cocaine intravenous self-administration (IVSA) in both sexes. We observed distinct strain differences among the founders and CC strains in all phases of self-administration, with heritability estimates ranging from 0 to 0.585 and many CC and J:DO phenotypic values exceeding the range of founders including the C57BL/6J strain. Sex differences were common across behaviors, some manifesting as main effects, others as strain interactions. Finally, by adopting a multi-stage design, we identified extreme strains for various cocaine intake and response traits and evaluated whether these strains exhibited differences in behavioral assays that model compulsive drug seeking. Together, these findings demonstrate the utility of extended self-administration protocols in advanced mouse populations for discovery and characterization of biological mechanisms of substance use traits and for preclinical studies in relevant, complex mouse models.

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Mutation of the white gene in Drosophila has broad phenotypic and transcriptomic effects

Rickle, A.; Sudhakar, K.; Booms, A.; Stirtz, E.; Lempradl, A.

2025-03-03 genetics 10.1101/2025.03.03.639943 medRxiv
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The white (w) gene, one of the most widely used genetic markers in Drosophila research, serves as a standard background mutation for transgene insertions and genetic manipulations1. While its primary function involves eye pigmentation, mutations in white have been associated with diverse phenotypic effects, including those related to metabolism, behavior, and stress responses2-19. However, many studies using these mutants do not account for differences in genetic background, raising concerns about the interpretation of experimental results. To ensure that the observed phenotypic differences are attributable to white itself, rather than other genetic differences due to background, we established isogenic fly strains through backcrossing that differ only by the presence or absence of the white gene. Given the likely metabolic consequences of white gene deletion and its crucial role in neurotransmitter production, we focused our phenotyping assays on behavioral, metabolic, and fitness-related outcomes and performed transcriptomic analysis on adult fly heads. Our findings reveal widespread changes in adult brain gene expression and behavioral, metabolic, and fitness traits, demonstrating that loss of white influences multiple biological processes beyond its established role in eye pigmentation. These results emphasize the necessity of genetic background control in Drosophila research and warrant caution when using white mutants as a baseline for comparative studies.

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Behavioral and molecular underpinnings of performance variability in eyeblink conditioning in male and female mice

Roa Oyaga, M.; Koekkoek, S. K. E.; Badura, A.

2021-10-16 neuroscience 10.1101/2021.10.15.464518 medRxiv
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The functional and molecular sources of behavioral variability in mice are not fully understood. As a consequence, the predominant use of male mice has become a standard in animal research, under the assumption that males are less variable than females. Similarly, to homogenize genetic background, neuroscience studies have almost exclusively used the C57BL/6 (B6) strain. Here, we examined individual differences in performance in the context of associative learning. We performed delayed eyeblink conditioning while recording locomotor activity in mice from both sexes in two strains (B6 and B6CBAF1). Further, we used a C-FOS immunostaining approach to explore brain areas involved in eyeblink conditioning across subjects and correlate them with behavioral performance. We found that B6 male and female mice show comparable variability in this task and that females reach higher learning scores. We found a strong positive correlation across sexes between learning scores and voluntary locomotion. C-FOS immunostainings revealed positive correlations between C-FOS positive cell density and learning in the cerebellar cortex, as well as multiple previously unreported extra-cerebellar areas. We found consistent and comparable correlations in eyeblink performance and C-fos expression in B6 and B6CBAF1 females and males. Taken together, we show that differences in motor behavior and activity across brain areas correlate with learning scores during eyeblink conditioning across strains and sexes.

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Extensive characterization of a Williams Syndrome murine model shows Gtf2ird1-mediated rescue of select sensorimotor tasks, but no effect on enhanced social behavior

Dougherty, J. D.; Nygaard, K. R.; Maloney, S. E.; Swift, R. G.; McCullough, K. B.; Wagner, R. E.; Fass, S. B.; Garbett, K.; Mirnics, K.; Veenstra-VanderWeele, J.

2023-01-18 animal behavior and cognition 10.1101/2023.01.18.523029 medRxiv
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Williams Syndrome is a rare neurodevelopmental disorder exhibiting cognitive and behavioral abnormalities, including increased social motivation, risk of anxiety and specific phobias along with perturbed motor function. Williams Syndrome is caused by a microdeletion of 26-28 genes on chromosome 7, including GTF2IRD1, which encodes a transcription factor suggested to play a role in the behavioral profile of Williams Syndrome. Duplications of the full region also lead to frequent autism diagnosis, social phobias, and language delay. Thus, genes in the region appear to regulate social motivation in a dose-sensitive manner. A Complete Deletion mouse, heterozygously eliminating the syntenic Williams Syndrome region, has been deeply characterized for cardiac phenotypes, but direct measures of social motivation have not been assessed. Furthermore, the role of Gtf2ird1 in these behaviors has not been addressed in a relevant genetic context. Here, we have generated a mouse overexpressing Gtf2ird1, which can be used both to model duplication of this gene alone and to rescue Gtf2ird1 expression in the Complete Deletion mice. Using a comprehensive behavioral pipeline and direct measures of social motivation, we provide evidence that the Williams Syndrome Critical Region regulates social motivation along with motor and anxiety phenotypes, but that Gtf2ird1 complementation is not sufficient to rescue most of these traits, and duplication does not decrease social motivation. However, Gtf2ird1 complementation does rescue light-aversive behavior and performance on select sensorimotor tasks, perhaps indicating a role for this gene in sensory processing or integration.

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A Four "Core Genotypes" rat model to distinguish mechanisms underlying sex-biased phenotypes and diseases

Arnold, A. P.; Chen, X.; Grzybowski, M.; Ryan, J. M.; Sengelaub, D. R.; Mohanroy, T.; Furlan, V. A.; Grisham, W.; Malloy, L.; Takizawa, A.; Wiese, C. B.; Vergnes, L.; Skaletsky, H.; Page, D. C.; Reue, K.; Harley, V. R.; Dwinell, M.; Geurts, A.

2023-02-10 genetics 10.1101/2023.02.09.527738 medRxiv
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BackgroundPrevious research on Four Core Genotypes and XY* mice has been instrumental in establishing important effects of sex-chromosome complement that cause sex differences in physiology and disease. We have generated rat models using similar modifications of the testis-determining gene Sry, to produce XX and XY rats with the same type of gonad, as well as XO, XXY and XYY rats with varying gonads. The models permit discovery of novel sex-chromosome effects (XX vs. XY) that contribute to sex differences in any rat phenotype, and test for effects of different numbers of X or Y chromosomes. MethodsXY rats were created with an autosomal transgene of Sry, producing XX and XY progeny with testes. In other rats, CRISPR-Cas9 technology was used to remove Y chromosome factors that initiate testis differentiation, producing fertile XY gonadal females. Interbreeding of these lines produced rats with interesting combinations of sex chromosomes and gonads: XO, XX, XY, XXY rats with ovaries; and XO, XX, XY, XXY, and XYY rats with testes. These groups can be compared to detect sex differences caused by sex-chromosome complement (XX vs. XY) and/or by gonadal hormones (rats with testes vs. ovaries). Other comparisons detect the effects of X or Y chromosome number (in gonadal females: XO vs. XX, XX vs. XXY, XO vs. XY, XY vs. XXY; in gonadal males: XY vs. XXY, XY vs. XYY; XX vs. XXY, XO vs. XY). ResultsWe measured numerous phenotypes to characterize these models, including gonadal histology, breeding performance, anogenital distance, levels of reproductive hormones, body and organ weights, and central nervous system sexual dimorphisms. Serum testosterone levels were comparable in adult XX and XY gonadal males. Phenotypes previously known to be sexually differentiated by the action of gonadal hormones were found to be similar in XX and XY rats with the same type of gonad, suggesting that XX and XY rats with the same type of gonad have comparable levels of gonadal hormones at various stages of development. ConclusionThe results establish powerful new models to discriminate sex-chromosome and gonadal hormone effects that cause sexual differences in rat physiology and disease. Plain English SummaryThe Four Core Genotypes and XY* mouse models have been broadly useful for determining if sex differences in any mouse phenotype are caused by gonadal hormones, or by sex-chromosome complement (XX vs. XY), and if sex-chromosome effects are caused by X- or Y-linked mechanisms. Using gene knockout and transgenic methods, we have produced laboratory rat models that offer similar capabilities. The new rat models allow investigators to test with relative ease, for the first time, if a sex difference in a rat trait is caused by effects of XX vs. XY sex chromosomes, not mediated by effects of gonadal hormones, and to narrow the search for X or Y genes that have that role. The models produce XO, XX, XY, and XXY rats with ovaries, and XO, XX, XY, XXY, and XYY rats with testes. The four XX and XY groups represent a Four Core Genotypes rat model, comparison of which tests for sex-chromosome and gonadal hormonal effects that cause female and male rats to have different physiological or disease traits. Moreover, comparison of rats with different numbers of X chromosomes, or of Y chromosomes, but with the same type of gonad, provides evidence regarding the effects of X or Y dosage on rat traits. The new models will improve understanding of the impact of sex chromosomes on diseases or traits that are best modeled in rats. They will also improve understanding of the evolution of functional roles of sex chromosomes. HighlightsIt is advantageous to establish the factors that cause sex differences in diseases, because those factors mitigate or exacerbate diseases. We have produced new laboratory rats that have different types and numbers of sex chromosomes but the same type of gonad, allowing investigation of the role of sex chromosomes in causing sex differences in physiology and disease. The new rat lines allow comparison of XX and XY rats with the same type of gonad, to detect sex differences caused in part by the sex chromosomes. Other comparisons of rats with the same gonad but with different numbers of X chromosomes (XO vs. XX, XY vs XXY) or of Y chromosomes (XO vs. XY, XX vs. XXY, XY vs. XYY) detect effects of X or Y chromosome number. These resources can uncover sex-chromosome effects on any rat phenotype.

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Transgenerational effects of alcohol on intoxication sensitivity in Caenorhabditis elegans

Guzman, D. M.; Chakka, K.; Shi, T.; Marron, A.; Fiorito, A. E.; Rahman, N. S.; Ro, S.; Sucich, D. G.; Pierce, J.

2022-07-10 genetics 10.1101/2022.07.10.499458 medRxiv
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Alcohol abuse and dependence have a substantial heritable component. Although the genome has been considered the sole vehicle of heritable phenotypes, recent studies suggest that drug or alcohol exposure may induce alterations in gene expression that are transmitted across generations. Still, the transgenerational impact of alcohol use (and abuse) remains largely unexplored in part because multigenerational studies using rodent models present challenges for time, sample size, and genetic heterogeneity. Here, we took advantage of the extremely short generation time, large broods, and clonal form of reproduction of the nematode Caenorhabditis elegans. We developed a model of preconception parental alcohol exposure to test alterations in behavioral responses to acute alcohol treatment (intoxication) in subsequent F1, F2 and F3 generations. We found that a chronic alcohol-treatment paradigm in the parental generation resulted in alcohol-naive F3 progeny displaying moderate resistance to intoxication. To compare the treatment duration and timing on this transgenerational effect, we repeated the study using an intermittent treatment paradigm. We found that intermittent treatment resulted in alcohol-naive F3 progeny displaying moderate hypersensitivity to intoxication. Further study of this phenomena using this new C. elegans model may yield mechanistic insights into how transgenerational effects may occur in other animals.

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Genotype Effects and Gene x Environment Interactions on Inter-Individual Licking Received and Licking Provisioning in Female Rat Offspring

Lauby, S. C.; Ashbrook, D. G.; Malik, H. R.; Chatterjee, D.; Pan, P.; Fleming, A. S.; McGowan, P. O.

2019-12-30 neuroscience 10.1101/2019.12.29.890467 medRxiv
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In most mammals, mothers exhibit natural variations in care that propagate between generations of female offspring. However, there is limited information on genetic variation that influences this propagation. We assessed early-life maternal care received by individual female rat offspring in relation to genetic polymorphisms linked to dopaminergic activity, maternal care provisioning, and dopaminergic activity in the maternal brain. We also conducted a systematic analysis of other genetic variants potentially related to maternal behavior in our Long-Evans rat population. We found that dopamine receptor 2 (rs107017253) variation interacted with the relationship between early-life maternal care received and dopamine levels in the nucleus accumbens which, in turn, were associated with later-life maternal care provisioning. We also discovered and validated new variants that were predicted by our systematic analysis. Our findings suggest that genetic variation influences the relationship between maternal care received and maternal care provisioning, similar to findings in human populations.

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Extreme Phenotypic Diversity in Operant Responding for an Intravenous Cocaine or Saline Infusion in the Hybrid Mouse Diversity Panel

Bagley, J. R.; Khan, A. H.; Smith, D. J.; Jentsch, J. D.

2021-02-05 animal behavior and cognition 10.1101/2021.02.03.429584 medRxiv
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Cocaine self-administration is complexly determined trait, and a substantial proportion of individual differences in cocaine use is determined by genetic variation. Cocaine intravenous self-administration (IVSA) procedures in laboratory animals provide opportunities to prospectively investigate neurogenetic influences on the acquisition of voluntary cocaine use. Large and genetically diverse mouse populations, including the Hybrid Mouse Diversity Panel (HMDP), have been developed for forward genetic approaches that can reveal genetic variants that influence traits like cocaine IVSA. This population enables high resolution and well-powered genome wide association studies, as well as the discovery of genetic correlations. Here, we provide information on cocaine (or saline - as a control) IVSA in 65 strains of the HMDP. We found cocaine IVSA to be substantially heritable in this population, with strain-level intake ranging for near zero to >25 mg/kg/session. Though saline IVSA was also found to be heritable, a very modest genetic correlation between cocaine and saline IVSA indicates that operant responding for the cocaine reinforcer was influenced by a substantial proportion of unique genetic variants. These data indicate that the HMDP is suitable for forward genetic approaches for the analysis of cocaine IVSA, and this project has also led to the discovery of reference strains with extreme cocaine IVSA phenotypes, revealing them as polygenic models of risk and resilience to cocaine reinforcement. This is part of an ongoing effort to characterize genetic and genomic variation that moderates cocaine IVSA, which may, in turn, provide a more comprehensive understanding of cocaine risk genetics and neurobiology.

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Directional selection failed to produce changes in olfactory Y-maze learning and memory but induced changes in climbing phenotypes

Hamlin, V. L.; Baumann, J.; Heffern, R.; Franke, A.; King, E. G.

2025-05-23 genetics 10.1101/2025.05.18.654242 medRxiv
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Learning and memory are fundamental complex traits that allow for assessment and response to changes in their environment. Beyond cognition, these high order traits require several subcomponents, from sensory perception to motor output, in order to execute the intended response to a stimulus. Within the population, we see variation among individuals in abilities to perform learning and memory tasks. It is still largely unknown what genetic factors contribute to variability in these phenotypes; therefore, our study aims to gain better insight by utilizing a directional selection paradigm to drive differences in olfactory learning and memory behavior. Directional selection experiments allow for evaluation of the response to selective pressures across multiple biological levels through amplification of phenotype differences between groups. We used a reward based olfactory associative learning and memory assay to train a synthetic population of flies allowing only those who passed both tests to mate across ten generations. Our study shows significant changes in the climbing subcomponent required to perform well on the y-maze assay, however, we did not observe any significant changes to olfactory learning and memory behavior.

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Assessment of Operant Learning and Memory in Mice Born through Intracytoplasmic Sperm Injection

Lewon, M.; Wang, Y.; Peters, C. M.; Peterson, M.; Zheng, H.; Hayes, L. J.; Yan, W.

2020-02-12 genetics 10.1101/2020.02.11.942235 medRxiv
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Study questionAre there differences in operant learning and memory between mice born through intracytoplasmic sperm injection (ICSI) and naturally-conceived control (CTL) mice? Summary answerICSI females exhibited deficits in acquisition learning relative to CTL females, whereas ICSI males exhibited deficiency in discrimination learning and memory relative to CTL males during initial assessments. ICSI and CTL groups exhibited equally poor long-term retention of learned discrimination and memory performances at old age. What is known alreadySome human outcome studies have suggested that ICSI might be associated with an increased risk of certain cognitive disorders, but only one of two behavioral studies with ICSI mouse models have reported differences between ICSI and CTL females. No studies to date have investigated associative learning in ICSI mice. Study design, size, duration36 ICSI mice (18 male, 18 female) and 37 CTL mice (19 male, 18 female) aged 3-6 months were compared in a series of operant learning procedures that assessed acquisition of a new behavior, discrimination learning, and memory. 16 ICSI mice (9 male, 7 female) and 17 CTL mice (10 males, 7 females) received follow-up discrimination learning and memory assessments at 12 months of age (six months after the end of initial training) to evaluate retention and reacquisition of learned performances. Participants/materials, setting, methodsMice received daily operant learning sessions in experimental chambers in which all stimulus events and the recording of responses were automated. Food rewards were delivered for responding under different conditions of reinforcement, which varied by procedure. Subjects received a successive series of sessions of nose poke acquisition training, discrimination training, and the delayed non-matching-to-position (DNTMP) memory procedure. Mixed repeated measures ANOVAs in which the between-subjects factor was group (ICSI vs. CTL) and the within-subjects factor was repeated exposures to learning procedures (i.e., sessions) were used to analyze data. Main results and the role of chanceIn comparisons between all mice (i.e., males and females combined), CTL mice exhibited superior performance relative to ICSI in response acquisition (p = 0.03), discrimination (p = 0.001), and memory (p = 0.007). Sex-specific comparisons between the groups yielded evidence of sexual dimorphism. ICSI females exhibited a deficit in acquisition learning relative to CTL females (p < 0.001) but there was not a significant difference between CTL and ICSI males. In the discrimination and memory tasks, ICSI males exhibited deficits relative to CTL males (p = 0.002 and p = 0.02, respectively) but the differences between females in these tasks were not significant. There was no difference in discrimination or memory retention/re-acquisition assessments conducted with mice at 12 months of age. ICSI males and females weighed significantly more than CTL counterparts at all points during the experiment. Limitations, reasons for cautionThe study was not blinded. All learning assessments utilized food reward; other assessments of operant, Pavlovian, and nonassociative learning are needed to fully characterize learning in ICSI mice and speculate regarding the implications for cognitive function in humans conceived via ICSI. Wider implications of the findingsStudying learning and memory processes in mouse models has the potential to shed light on ICSI outcomes at the level of cognitive function. Future research should use multiple learning paradigms, assess both males and females, and investigate the effects of variables related to the ICSI procedure. Studying cognitive function in ICSI is an interdisciplinary endeavor and requires coordination between researchers at the genetic and psychological levels of analysis. Study funding/competing interest(s)This work was supported, in part, by grants from NIH (P30GM110767, HD071736 and HD085506 to WY), the Templeton Foundation (Grant ID: 61174 to WY), and a New Scholarly Endeavor Grant from the University of Nevada, Reno Office of Research and Innovation (to ML, YW, HZ, LH, and WY). The authors declare no competing interests.

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Genetic Architecture of Addiction-Relevant Behaviors in Outbred Sprague-Dawley Rats Reveals Loci for Anxiety-Like and Nociceptive Traits

Chitre, A. S.; Hebda-Bauer, E. K.; Emery, M. A.; Li, F.; Nguyen, K.-M.; Wang, Y.; Cheng, R.; Polesskaya, O.; Watson, S. J.; Li, J.; Akil, H.; Palmer, A. A.

2026-02-19 genetics 10.64898/2026.02.18.706481 medRxiv
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Studies have shown that substance use liability is associated with novelty seeking, anxiety-like behavior, and pain sensitivity. We examined whether common genetic variation in outbred Sprague-Dawley rats explained variation in behavioral measures from three assays with established links to substance use: locomotor response to a novel environment, elevated plus maze, and tail flick. We estimated single-nucleotide polymorphism heritability and performed genome-wide association analyses using permutation-derived significance thresholds (N=534-654 rats across traits). Heritability estimates ranged from 0.14-0.38 across eleven traits. Three independent loci were identified: chromosome 1 for elevated plus maze open-arm behavior (=0.05), chromosome 14 for elevated plus maze immobility (=0.10), and chromosome 17 for tail flick latency (=0.05). Candidate genes included Slc18a2, Gfra1, and Pdzd8 (chromosome 1); Rel and Bcl11a (chromosome 14); and Eci2 and Eci3 (chromosome 17). We compared these loci with our genome wide association study of a F2 intercross of selectively bred high- and low-responder rats, originally derived from Sprague-Dawleys, that model individual differences in externalizing and internalizing behavior. The current loci are distinct from the ones identified in the bred lines. This difference likely reflects selection history in the high- and low-responder F2s, which focused on facets of exploratory locomotion, while loci for anxiety and pain sensitivity traits were identified in the outbreds. This highlights the benefit of using both outbred and selectively bred rats to probe causal variants contributing to individual differences in substance use liability. The current outbred findings implicate monoaminergic signaling, transcriptional control, and lipid metabolism as testable mechanisms for addiction-relevant behaviors.

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The Sikkim mouse (Mus pahari) exhibits distinct spatial, circadian, and social behaviors compared to laboratory mice

Vogt, C. C.; Sheehan, M. J.

2025-11-13 animal behavior and cognition 10.1101/2025.11.13.688123 medRxiv
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While the laboratory mouse is one of the most studied organisms on the planet, comparative research on the spatial and social structures of closely related Mus species remains limited. Here, we characterize the spatial, circadian, and social behavior of the Sikkim mouse (Mus pahari) wild-derived inbred strain PAH/Eij in comparison to the laboratory mouse strain C57BL/6J (Mus musculus domesticus, shortened to B6). Using a common garden approach, we monitored mice in replicate mixed-sex group social behavior trials within an indoor mesocosm using radiofrequency identification (RFID) antennae. M. pahari exhibited markedly reduced spatial exploration and highly stereotyped circadian activity that was strongly coupled to the dark phase of the light-dark cycle compared to B6 mice. Most strikingly, M. pahari displayed distinctive social behaviors characterized by strong male-male gregariousness and enhanced overall social tolerance, contrasting sharply with the relatively less social nature of B6 mice. These results demonstrate the genetic influence on social organization within the Mus genus and identify unique socio-spatial phenotypes in M. pahari, highlighting the considerable potential of this strain and species as a novel model for social behavior research.

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Variability of wheel running behavior in mice is dependent on housing, sex, and genetic background

Kanold-Tso, Z.; Plenz, D.

2022-10-28 neuroscience 10.1101/2022.10.28.514233 medRxiv
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Environmental enrichment (EE) has been increasingly used to enhance and support the physiological fitness and natural behavior of research animals. For mice, which are known to be highly active nocturnal animals that live in large social groups, the introduction of running wheels is a particularly promising approach in EE. When wheels are introduced to their home cage, mice increase their nocturnal locomotion activity by orders of magnitude. However, little is known about how mice share such a readily adopted EE. Here, we studied wheel running in single-housed and group-housed mice. We hypothesized that group-housed mice will compete over the scarce resource of a running wheel leading to a change in overall wheel usage compared to single-housed mice that have exclusive wheel access. We measured wheel locomotion in two strains of single-housed and group-housed mice over multiple 24h periods at sub-second temporal resolution using a custom-designed data acquisition system. We observed both sex- and housing-specific differences in wheel usage. In single-housed C57Bl/6 mice, mice ran at consistent speeds and females ran larger distances. In group housing, periods of slow locomotion speeds as well as speed transitions emerged with fewer breaks in wheel usage. This group effect was less pronounced in a genetic mouse model (parvalbumin-Cre on C57Bl/6 background). Our results demonstrate a change in wheel usage during group housing which supports competition over EE resources while enhancing overall locomotion in mice.

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A novel homecage operant task reveals circadian and behavioral dynamics of social motivation in mice

Chen, Y.; Maloney, S. E.; Kravitz, A.

2025-09-04 animal behavior and cognition 10.1101/2025.08.21.671364 medRxiv
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Deficits in social motivation are a core feature of many neurodevelopmental disorders, including autism spectrum disorders. While a range of tools have been developed to quantify social motivation in rodents, most rely on brief tests in dedicated apparatuses that can introduce stress and novelty, potentially reducing test reliability. Most current approaches are also typically not suited to studying learning across days or circadian rhythms of social motivation. To address these challenges, we developed a social operant task that can run around-the-clock for multiple days in the mouse homecage, continuously monitoring social motivation around the circadian cycle. The task consists of a custom-built automated door that was installed between two rodent homecages and configured so one mouse could trigger the door to open with a nose-poke action from within their cage. When open, the door allows for social interaction with the neighboring mouse through a perforated stainless-steel panel, which did not allow the mice to cross over into the neighboring cage. Mice opened the door multiple times each day, allowing us to quantify their amount and daily rhythms of social motivation. In our first experiment, C57BL/6J mice (both sexes) were individually housed with an empty adjacent cage for five days, after which a same-sex social partner was introduced for another nine days. Mice opened the door at significantly higher rates when the social partner was present vs. absent, confirming that mice were motivated to earn social interaction. This task also revealed a circadian rhythm to social motivation that peaked about 2 hours after the peak in their feeding rhythm. We speculate that mice first addressed their caloric needs each day before changing their priority to social behavior. Given prior literature implicating the dopamine system in social motivation, we also tested whether dopamine antagonists would block social motivation in our task in a new group of 14 mice (both sexes). The dopamine D1 receptor antagonist SCH23390 (delivered systemically at 0.3mg/kg SC) reduced social seeking without affecting locomotor activity or food intake, demonstrating a selective role for dopamine D1 receptors in social motivation. The dopamine D2 receptor antagonist haloperidol (delivered systemically at 0.3mg/kg SC) also reduced social seeking, but reduced locomotor activity and food intake as well, demonstrating a general reduction in behavior that was not specific to social motivation. Overall, our task offers a way for studying social motivation in the rodent homecage, which has advantages for studying disorders that involve both social and circadian disruptions.

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Dynamic Sex Differences in Reactive and Appetitive Aggression

Aubry, A.; Burnett, C. J.; Goodwin, N.; Li, L.; Navarrete, J.; Zhang, Y.; Tsai, V.; Durand-de Cuttoli, R.; Golden, S.; Russo, S.

2022-02-23 neuroscience 10.1101/2022.02.22.481480 medRxiv
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Aggression is an evolutionarily conserved, adaptive component of social behavior. Studies in male mice illustrate that aggression is influenced by numerous factors including the degree to which an individual finds aggression rewarding and will work for access to attack and subordinate mice. While such studies have expanded our understanding of the molecular and circuit mechanisms of male aggression very little is known about female aggression, owed in part to limited availability of valid mouse models in females. Here we use an ethologically relevant model of male vs. female aggression by pair housing adult male and female outbred CFW mice with opposite sex cage mates. We assess reactive (defensive) aggression in the resident intruder (RI) test and appetitive (rewarding) aggression in the aggression conditioned place preference (CPP) and operant self-administration (SA) tests. Our results show dramatic sex differences in both qualitative and quantitative aspects of reactive vs. appetitive aggression. Males exhibit more wrestling and less investigative behavior during RI, find aggression rewarding and will work for access to a subordinate to attack. Females exhibit more bites, alternate between aggressive behaviors and investigative behaviors more readily during RI, however, they do not find aggression to be rewarding or reinforcing. These results establish sex differences in aggression in mice, providing an important resource for the field to better understand the circuit and molecular mechanisms of aggression in both sexes.

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Cocaine-induced locomotor activation differs across six sets of inbred mouse substrains

Gaines, C. H.; Schoenrock, S. A.; Farrington, J.; Lee, D. F.; Aponte-Collazo, L. J.; Shaw, G.; Miller, D. R.; Ferris, M. T.; Pardo-Manuel de Villena, F.; Tarantino, L. M.

2021-11-08 genetics 10.1101/2021.11.08.467748 medRxiv
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Cocaine use disorders (CUD) are devastating for affected individuals and impose a significant burden on society, but there are currently no FDA-approved therapies. The development of novel and effective treatments has been hindered by substantial gaps in our knowledge about the etiology of these disorders. The risk for developing a CUD is influenced by genetics, the environment and complex interactions between the two. Identifying specific genes and environmental risk factors that increase CUD risk would provide an avenue for the development of novel treatments. Rodent models of addiction-relevant behaviors have been a valuable tool for studying the genetics of response to drugs of abuse. Traditional genetic mapping using genetically and phenotypically divergent inbred mice has been successful in identifying numerous chromosomal regions that influence addiction-relevant behaviors, but these strategies rarely result in identification of the causal gene or genetic variant. To overcome this challenge, reduced complexity crosses (RCC) between closely related inbred mouse substrains have been proposed as a method for rapidly identifying and validating functional variants. The RCC approach is dependent on identifying phenotypic differences between substrains. To date, however, the study of addiction-relevant behaviors has been limited to very few sets of substrains, mostly comprising the C57BL/6 lineage. The present study expands upon the current literature to assess cocaine-induced locomotor activation in 20 inbred mouse substrains representing six inbred strain lineages (A/J, BALB/c, FVB/N, C3H/He, DBA/2 and NOD) that were either bred in-house or supplied directly by a commercial vendor. To our knowledge, we are the first to identify significant differences in cocaine-induced locomotor response in several of these inbred substrains. The identification of substrain differences allows for the initiation of RCC populations to more rapidly identify specific genetic variants associated with acute cocaine response. The observation of behavioral profiles that differ between mice generated in-house and those that are vendor-supplied also presents an opportunity to investigate the influence of environmental factors on cocaine-induced locomotor activity.

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Differential processing of delay versus uncertainty in male but not female 16p11.2 hemideletion mice

Rojas, G. R.; Heller, A. T.; Grissom, N. M.

2023-10-06 animal behavior and cognition 10.1101/2023.10.04.560951 medRxiv
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Neurodevelopmental disorders are associated with differences in learning and motivation that can influence executive function, including behavioral flexibility and decision making. 16p11.2 hemideletion is a chromosomal copy number variant that is linked to neurodevelopmental disorders. 16p11.2 hemideletion in mice has been previously found to produce male-biased changes in reward learning, but the link between this and altered flexible decision making is poorly understood. We challenged 16p11.2 hemideletion mice with two reward-guided decision making tasks assessing flexible decision making under cost, delay and probability discounting. Both tasks elicited long-term changes in flexible decision making that separated 16p11.2 hemideletion males from wildtype males. In delay discounting,16p11.2 hemideletion males had a stronger, less flexible preference for the large reward at long delays, and this effect was reduced as wildtype males adjusted their preference to match that of the hemideletion males. In probability discounting, 16p11.2 hemideletion males initially had a similar preference for seeking improbable large rewards as did wildtype males, but over time began to prefer certainty to a greater extent than did wildtype males. Female mice discounted similarly for delayed or risky rewards regardless of the presence of the copy number variant. We have previously seen that male 16p11.2 hemideletion mice commit fewer nonreinforced responses than male wildtype mice in an operant setting, which we replicate here in delay discounting, while the introduction of risky rewards eliminates genotype differences in nonreinforced responses. Overall these data suggest that 16p11.2 hemideletion in males leads to differential processing of costs of delay versus inconsistency, with greater aversion to uncertainty than delays, and greater behavioral control by cues that consistently predict an outcome.

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Bone Morphogenetic Protein signaling pathway - ethanol interactions disrupt palate formation independent of gata3

Lovely, C. B.

2024-11-15 developmental biology 10.1101/2024.11.15.623833 medRxiv
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Fetal Alcohol Spectrum Disorders (FASD) describes a wide array of neurological defects and craniofacial malformations, associated with ethanol teratogenicity. While there is growing evidence for a genetic component to FASD, little is known of the genes underlying these ethanol-induced defects. Along with timing and dosage, genetic predispositions may help explain the variability within FASD. From a screen for gene-ethanol interactions, we found that mutants for Bmp signaling components are ethanol-sensitive leading to defects in the zebrafish palate. Loss of Bmp signaling results in reductions in gata3 expression in the maxillary domain of the neural crest in the 1st pharyngeal arch, leading to palate defects while upregulation of human GATA3 rescues these defects. Here, we show that ethanol-treated Bmp mutants exhibit misshaped and/or broken trabeculae. Surprisingly, up regulation of GATA3 does not rescue ethanol-induced palate defects and gata3 expression was not altered in ethanol-treated Bmp mutants or dorsomorphin-treated larvae. Timing of ethanol sensitivity shows that Bmp mutants are ethanol sensitive from 10-18 hours post-fertilization (hpf), prior to Bmps regulation of gata3 in palate formation. This is consistent with our previous work with dorsomorphin-dependent knock down of Bmp signaling from 10-18 hpf disrupting endoderm formation and subsequent jaw development. Overall, this suggests that ethanol disrupts Bmp-dependent palate development independent of and earlier than the role of gata3 in palate formation by disrupting epithelial development. Ultimately, these data demonstrate that zebrafish is a useful model to identify and characterize gene-ethanol interactions and this work will directly inform our understanding of FASD. HighlightsO_LIBmp pathway mutants are ethanol sensitive resulting in palate defects. C_LIO_LIEthanol disrupts Bmp-dependent palate development independent of gata3. C_LIO_LITiming of ethanol sensitivity suggests ethanol disrupts Bmp-dependent epithelial morphogenesis. C_LI

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The Role of Gene Encoding Variation of DRD4 in the Relationship between Inattention and Seasonal Daylight

Vollebregt, M.; Franke, B.; Buitelaar, J. K.; Arnold, L. E.; Faraone, S.; Grevet, E. H.; Reif, A.; Zayats, T.; Bralten, J.; Bau, C. H.; Haavik, J.; Kuntsi, J.; Cupertino, R.; Loo, S.; Lundervold, A. J.; Ribases, M.; Sanchez-Mora, C.; Ramos-Quiroga, J. A.; Asherson, P.; Swanson, J. M.; Arns, M.

2019-10-31 genetics 10.1101/825083 medRxiv
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Daylight is the strongest synchronizer of human circadian rhythms. The circadian pathway hypothesis posits that synchrony between daylight and the circadian system relates to (in)attention. The dopamine neurotransmitter system is implicated in regulating the circadian system as well as in (attention)-deficit hyperactivity disorder [ADHD]. We studied the role of functional genetic variation in the gene encoding of dopamine-receptor-D4 (DRD4) in the relationship between inattention and seasonal daylight (changes). Gene-by-environment (GxE) mega-analyses were performed across eight studies including 3757 adult participants (with and without ADHD). We tested 1) the Spring-focus hypothesis, in which attention in 7R-carriers normalizes with increasing daylight levels preceding measurement, 2) the Summer-born ADHD hypothesis, in which 7R-carriers report more inattention when born in spring/summer than in autumn/winter, 3) the Winter-born ADHD hypothesis, opposing the second hypothesis. The Spring-focus hypothesis was upheld (1386 ADHD, 760 controls; d=-0.16 between periods); 7R-carriers reported even less inattention than 7R-non-carriers after winter solstice (d=0.27 between genotype-groups). Results were diagnosis-independent. Sensitivity analyses at individual study level confirmed the circannual patterns for 7R-carriers. Incorporating geographic changes into the independent measure, we also calculated changes in sunlight levels. This approach likewise showed that inattention correlated negatively with increasing light levels in 7R-carriers (r=-.135). Results emphasize peripheral effects of dopamine and the effects of (seasonal) daylight changes on cognition.